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cancer_predict
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Fix js contents.

This commit is contained in:
BoHung Chiu 2022-01-23 16:58:03 +08:00
parent a56f6ba5e3
commit 9d2872b884
2 changed files with 130 additions and 138 deletions
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244
app/assets/javascripts/cancer_predict.js
View File

@ -385,7 +385,7 @@ $(document).ready(function(){
$('#cancer_predict_result_block').css('display','block'); $('#cancer_predict_result_block').css('display','block');
var lpv_real = [result.responseJSON['lpv_variable']]; var lpv_real = [result.responseJSON['lpv_variable']];
var lpv_dict={} var lpv_dict={}
var lpv_calc=/*lpv_calc_formula_start*/{1: "0.8095037^( exp(lpv_current) )",1.5: "0.729158^( exp(lpv_current) )",2: "0.6717211^( exp(lpv_current) )", 2.5: "0.6056773^( exp(lpv_current) )"}/*lpv_calc_formula_end*/ var lpv_calc=/*lpv_calc_formula_start*/{"1":"0.8095037**( Math.exp(lpv_current) )","1.5":"0.729158**( Math.exp(lpv_current) )","2":"0.6717211**( Math.exp(lpv_current) )","2.5":"0.6056773**( Math.exp(lpv_current) )"}/*lpv_calc_formula_end*/
active_treatment.push = function() { active_treatment.push = function() {
if(arguments.length == 1){ if(arguments.length == 1){
var year = $('#current_year').attr('value'); var year = $('#current_year').attr('value');
@ -434,7 +434,8 @@ $(document).ready(function(){
if(index < this.length - 1){ if(index < this.length - 1){
for(var i = index + 1;i < this.length; i++){ for(var i = index + 1;i < this.length; i++){
change_object_variables(lpv_real[i] , lpv_dict[arguments[0]] , '-' , 'self'); change_object_variables(lpv_real[i] , lpv_dict[arguments[0]] , '-' , 'self');
var servive_ratio = round((Math.exp(lpv_calc[year])**Math.exp(lpv_real[i]))*100,2); var lpv_current = lpv_real[i];
var servive_ratio = round(eval(lpv_calc[year])*100,2);
servive_ratio_arr[i] = servive_ratio; servive_ratio_arr[i] = servive_ratio;
var benefit = servive_ratio - ((i == index+1) ? servive_ratio_arr[index - 1] : servive_ratio_arr[i - 1]); var benefit = servive_ratio - ((i == index+1) ? servive_ratio_arr[index - 1] : servive_ratio_arr[i - 1]);
$('tr.'+active_treatment[i]+' td.Overall_Survival').html(servive_ratio+'%'); $('tr.'+active_treatment[i]+' td.Overall_Survival').html(servive_ratio+'%');
@ -592,170 +593,163 @@ $(document).ready(function(){
}; };
/* auto add start */ /* auto add start */
function calculate_first_lpv(result_json){ function calculate_first_lpv(result_json){
result = {}; result = {};
var map_values , mapping_hash , temp_index ,temp_value , index , closest_value; var map_values , mapping_hash , temp_index ,temp_value , index , closest_value;
result['sex_value'] = (2 - Number(result_json['sex_value'])); result['sex_value'] = (2 - Number(result_json['sex_value']));
result['age'] = Number(result_json['age']); result['age'] = Number(result_json['age']);
mapping_hash = mapping_data_from_csv['age']; mapping_hash = mapping_data_from_csv['age'];
temp_index = 0; temp_index = 0;
temp_value = result[age]; temp_value = result[age];
index = 0; index = 0;
$.each(mapping_hash,function(k,v){ $.each(mapping_hash,function(k,v){
if( i == 0 ){ if( i == 0 ){
var index_val = v.indexOf(temp_value); var index_val = v.indexOf(temp_value);
if( index_val != -1 ){ if( index_val != -1 ){
temp_index = index_val; temp_index = index_val;
}else{ }else{
closest_value = v.get_nearest_value(temp_value); closest_value = v.get_nearest_value(temp_value);
temp_index = v.indexOf(closest_value) temp_index = v.indexOf(closest_value)
} }
} }
result[k] = v[temp_index]; result[k] = v[temp_index];
index++; index++;
}); });
result['calH'] = Number(result_json['calH']); result['calH'] = Number(result_json['calH']);
mapping_hash = mapping_data_from_csv['calH']; mapping_hash = mapping_data_from_csv['calH'];
temp_index = 0; temp_index = 0;
temp_value = result[calH]; temp_value = result[calH];
index = 0; index = 0;
$.each(mapping_hash,function(k,v){ $.each(mapping_hash,function(k,v){
if( i == 0 ){ if( i == 0 ){
var index_val = v.indexOf(temp_value); var index_val = v.indexOf(temp_value);
if( index_val != -1 ){ if( index_val != -1 ){
temp_index = index_val; temp_index = index_val;
}else{ }else{
closest_value = v.get_nearest_value(temp_value); closest_value = v.get_nearest_value(temp_value);
temp_index = v.indexOf(closest_value) temp_index = v.indexOf(closest_value)
} }
} }
result[k] = v[temp_index]; result[k] = v[temp_index];
index++; index++;
}); });
result['calAH'] = Number(result_json['calAH']); result['calAH'] = Number(result_json['calAH']);
mapping_hash = mapping_data_from_csv['calAH']; mapping_hash = mapping_data_from_csv['calAH'];
temp_index = 0; temp_index = 0;
temp_value = result[calAH]; temp_value = result[calAH];
index = 0; index = 0;
$.each(mapping_hash,function(k,v){ $.each(mapping_hash,function(k,v){
if( i == 0 ){ if( i == 0 ){
var index_val = v.indexOf(temp_value); var index_val = v.indexOf(temp_value);
if( index_val != -1 ){ if( index_val != -1 ){
temp_index = index_val; temp_index = index_val;
}else{ }else{
closest_value = v.get_nearest_value(temp_value); closest_value = v.get_nearest_value(temp_value);
temp_index = v.indexOf(closest_value) temp_index = v.indexOf(closest_value)
} }
} }
result[k] = v[temp_index]; result[k] = v[temp_index];
index++; index++;
}); });
result['calDH'] = Number(result_json['calDH']); result['calDH'] = Number(result_json['calDH']);
mapping_hash = mapping_data_from_csv['calDH']; mapping_hash = mapping_data_from_csv['calDH'];
temp_index = 0; temp_index = 0;
temp_value = result[calDH]; temp_value = result[calDH];
index = 0; index = 0;
$.each(mapping_hash,function(k,v){ $.each(mapping_hash,function(k,v){
if( i == 0 ){ if( i == 0 ){
var index_val = v.indexOf(temp_value); var index_val = v.indexOf(temp_value);
if( index_val != -1 ){ if( index_val != -1 ){
temp_index = index_val; temp_index = index_val;
}else{ }else{
closest_value = v.get_nearest_value(temp_value); closest_value = v.get_nearest_value(temp_value);
temp_index = v.indexOf(closest_value) temp_index = v.indexOf(closest_value)
} }
} }
result[k] = v[temp_index]; result[k] = v[temp_index];
index++; index++;
}); });
result['fat'] = Number(result_json['fat']); result['fat'] = Number(result_json['fat']);
mapping_hash = mapping_data_from_csv['fat']; mapping_hash = mapping_data_from_csv['fat'];
temp_index = 0; temp_index = 0;
temp_value = result[fat]; temp_value = result[fat];
index = 0; index = 0;
$.each(mapping_hash,function(k,v){ $.each(mapping_hash,function(k,v){
if( i == 0 ){ if( i == 0 ){
var index_val = v.indexOf(temp_value); var index_val = v.indexOf(temp_value);
if( index_val != -1 ){ if( index_val != -1 ){
temp_index = index_val; temp_index = index_val;
}else{ }else{
closest_value = v.get_nearest_value(temp_value); closest_value = v.get_nearest_value(temp_value);
temp_index = v.indexOf(closest_value) temp_index = v.indexOf(closest_value)
} }
} }
result[k] = v[temp_index]; result[k] = v[temp_index];
index++; index++;
}); });
result['N4'] = (2 - Number(result_json['N4'])); result['N4'] = (2 - Number(result_json['N4']));
result['O20'] = (2 - Number(result_json['O20']));
result['O18'] = (2 - Number(result_json['O18']));
result['N12'] = (2 - Number(result_json['N12'])); result['N12'] = (2 - Number(result_json['N12']));
result['N20'] = (2 - Number(result_json['N20'])); result['N20'] = (2 - Number(result_json['N20']));
result['N31'] = (2 - Number(result_json['N31'])); result['N31'] = (2 - Number(result_json['N31']));
result['O6'] = (2 - Number(result_json['O6'])); result['O6'] = (2 - Number(result_json['O6']));
result['N34'] = (2 - Number(result_json['N34'])); result['N34'] = (2 - Number(result_json['N34']));
result['N46'] = (2 - Number(result_json['N46']));
result['N14'] = (2 - Number(result_json['N14'])); result['N14'] = (2 - Number(result_json['N14']));
result['N29'] = (2 - Number(result_json['N29']));
result['N2'] = (2 - Number(result_json['N2']));
result['N26'] = (2 - Number(result_json['N26'])); result['N26'] = (2 - Number(result_json['N26']));
result['O3'] = (2 - Number(result_json['O3']));
result['O20'] = (2 - Number(result_json['O20']));
result['O18'] = (2 - Number(result_json['O18']));
result['O11'] = (2 - Number(result_json['O11'])); result['O11'] = (2 - Number(result_json['O11']));
result['N29'] = (2 - Number(result_json['N29']));
result['N6'] = (2 - Number(result_json['N6'])); result['N6'] = (2 - Number(result_json['N6']));
result['O14'] = (2 - Number(result_json['O14'])); result['O14'] = (2 - Number(result_json['O14']));
result['N43'] = (2 - Number(result_json['N43'])); result['N43'] = (2 - Number(result_json['N43']));
result['O3'] = (2 - Number(result_json['O3']));
result['O17'] = (2 - Number(result_json['O17'])); result['O17'] = (2 - Number(result_json['O17']));
result['O9'] = (2 - Number(result_json['O9'])); result['O9'] = (2 - Number(result_json['O9']));
try{ try{
result['lpv'] = (A = 0.1327868* (result["sex_value"]- 0.4858824) + 0.0371720* (result["age_test1"] - 61.56000) -0.07447278* (result["age_test2"] - 13.10152) + 0.4315686* (result["age_test3"] - 0.9844332) + 0.0009163615*( result["calH_test1"] - 182.9347) -0.0007536899*( result["calH_test2"] - 124.8706) -0.0004697183*( result["calH_test3"] -80.75636) + 0.0001401325*( result["calAH_test1"] - 700.7824) -0.001349783*( result["calAH_test2"] - 634.2167) +0.001753832*( result["calAH_test3"] -419.3361) + 0.0001906046*( result["calDH_test1"] -835.2894) -0.000251567*( result["calDH_test2"] - 213.1630) -0.002173942*( result["fat_test1"] -108.4149)+0.003066541*( result["fat_test2"] - 28.33497) +0.6700708*(result["N4"]-0.3241176) +0.3336162*(result["O3"]-0.4994118) +0.1322476*(result["O20"]-0.1741176) +0.9084972*(result["O18"]-0.008823529) +0.2978388*(result["N12"]-0.1152941) +0.1777935*(result["N20"]-0.3582353) +1.588042*(result["N31"]-0.002352941) +0.2197419*(result["O6"]-0.07823529) +1.791159*(result["N34"]-0.001176471) -14.02639*(result["N46"]-0.003529412) +0.4305973*(result["N14"]-0.02176471) -0.4472885*(result["N29"]-0.02411765) -1.570431*(result["N20"]-0.0005882353) +0.2601319*(result["N26"]-0.04941176) -0.2364269*(result["O11"]-0.1164706) +0.1784179*(result["N6"]-0.1070588) +0.6023170*(result["O14"]-0.01294118) -1.031959*(result["N43"]-0.007058824) +0.4257809*(result["O17"]-0.01823529) +0.2002546*(result["O9"]-0.06176471)); result['lpv'] = (A = 0.1327868* (result["sex_value"]- 0.4858824) + 0.0371720* (result["age_test1"] - 61.56000) -0.07447278* (result["age_test2"] - 13.10152) + 0.4315686* (result["age_test3"] - 0.9844332) + 0.0009163615*( result["calH_test1"] - 182.9347) -0.0007536899*( result["calH_test2"] - 124.8706) -0.00004697183*( result["calH_test3"] -80.75636) + 0.0001401325*( result["calAH_test1"] - 700.7824) -0.001349783*( result["calAH_test2"] - 634.2167) +0.001753832*( result["calAH_test3"] -419.3361) + 0.0001906046*( result["calDH_test1"] -835.2894) -0.000251567*( result["calDH_test2"] - 213.1630) -0.002173942*( result["fat_test1"] -108.4149)+0.003066541*( result["fat_test2"] - 28.33497) +0.6700708*(result["N4"]-0.3241176) +0.3336162*(result["O3"]-0.4994118) +0.1322476*(result["O20"]-0.1741176) +0.9084972*(result["O18"]-0.008823529) +0.2978388*(result["N12"]-0.1152941) +0.1777935*(result["N20"]-0.3582353) +1.588042*(result["N31"]-0.002352941) +0.2197419*(result["O6"]-0.07823529) +1.791159*(result["N34"]-0.001176471) +0.4305973*(result["N14"]-0.02176471) -0.4472885*(result["N29"]-0.02411765) +0.2601319*(result["N26"]-0.04941176) -0.2364269*(result["O11"]-0.1164706) +0.1784179*(result["N6"]-0.1070588) +0.6023170*(result["O14"]-0.01294118) -1.031959*(result["N43"]-0.007058824) +0.4257809*(result["O17"]-0.01823529) +0.2002546*(result["O9"]-0.06176471));
}catch(e){result['lpv'] = "error"}; }catch(e){result['lpv'] = "error"};
console.log(result['lpv']); console.log(result['lpv']);
result['lpv_variable']['A'] = A; result['lpv_variable']['A'] = A;
return result; return result;
}; };
function calculate_and_change_result_value(obj){ function calculate_and_change_result_value(obj){
obj.servive_ratio_arr = []; obj.servive_ratio_arr = [];
for(var i = 0;i<obj.active_treatment.length;i++){ for(var i = 0;i<obj.active_treatment.length;i++){
var servive_ratio = round((1-(calculate_servive_ratio(obj.year,obj.lpv_real[i])))*100,2); var servive_ratio = round((1-(calculate_servive_ratio(obj.year,obj.lpv_real[i])))*100,2);
var benefit = servive_ratio - obj.servive_ratio_arr[obj.servive_ratio_arr.length-1]; var benefit = servive_ratio - obj.servive_ratio_arr[obj.servive_ratio_arr.length-1];
obj.servive_ratio_arr.push(servive_ratio); obj.servive_ratio_arr.push(servive_ratio);
$('tr.'+obj.active_treatment[i]+' td.Overall_Survival').html(servive_ratio+'%'); $('tr.'+obj.active_treatment[i]+' td.Overall_Survival').html(servive_ratio+'%');
$('.'+obj.active_treatment[i]+'.Overall_Survival').html(servive_ratio); $('.'+obj.active_treatment[i]+'.Overall_Survival').html(servive_ratio);
if(i != 0){ if(i != 0){
$('tr.'+obj.active_treatment[i]+' td.Additional_Benefit').html(round(benefit,2)+'%'); $('tr.'+obj.active_treatment[i]+' td.Additional_Benefit').html(round(benefit,2)+'%');
$('.'+obj.active_treatment[i]+'.Additional_Benefit').html(Math.round(benefit)); $('.'+obj.active_treatment[i]+'.Additional_Benefit').html(Math.round(benefit));
} }
} }
//$('.'+obj.active_treatment[0]+'.Overall_Survival').html(Math.round(obj.servive_ratio_arr[0])); //$('.'+obj.active_treatment[0]+'.Overall_Survival').html(Math.round(obj.servive_ratio_arr[0]));
}; };
function calculate_servive_ratio(year,obj){ function calculate_servive_ratio(year,obj){
var servive_ratio; var servive_ratio;
var A = obj['A'];
var A = obj['A']; switch(year) {
switch(year) { case '1':
case '1': servive_ratio = 0.8095037**( Math.exp(A) );
servive_ratio = 0.8095037**( Math.exp(A) ); break;
break; case '1.5':
servive_ratio = 0.729158**( Math.exp(A) );
case '1.5': break;
servive_ratio = 0.729158**( Math.exp(A) ); case '2':
break; servive_ratio = 0.6717211**( Math.exp(A) );
break;
case '2': case '2.5':
servive_ratio = 0.6717211**( Math.exp(A) ); servive_ratio = 0.6056773**( Math.exp(A) );
break; break;
default:
case '2.5': console.log('not found year.');
servive_ratio = 0.6056773**( Math.exp(A) ); }
break; return servive_ratio;
}
default: /* auto add end */
console.log('not found year.');
}
return servive_ratio;
}
/* auto add end */
function submit_fcn(){ function submit_fcn(){
var post_json = get_input_data(); var post_json = get_input_data();
if(post_json != null){ if(post_json != null){
@ -923,4 +917,4 @@ $(window).resize(function(){
$('#cancer_table .cencer_table_name').css('max-width','39%'); $('#cancer_table .cencer_table_name').css('max-width','39%');
}; };
}; };
}); });

24
app/models/cancerpredictfields.rb
View File

@ -191,7 +191,7 @@ class Cancerpredictfields
if property[:is_num] == 1 if property[:is_num] == 1
js_code += "\t\t\t\tresult['#{@variable}'] = Number(result_json['#{@variable}']);\r\n" js_code += "\t\t\t\tresult['#{@variable}'] = Number(result_json['#{@variable}']);\r\n"
elsif property[:choice_fields].present? elsif property[:choice_fields].present?
if property[:map_values].class == Array && property[:choice_fields].class == Array && property[:map_values].length == property[:choice_fields].length if property[:need_map_values] == 1
js_code += "\t\t\t\tmap_values = #{property[:map_values]};\r\n" js_code += "\t\t\t\tmap_values = #{property[:map_values]};\r\n"
js_code += "\t\t\t\tresult['#{@variable}'] = map_values[Number(result_json['#{@variable}'']) - 1];\r\n" js_code += "\t\t\t\tresult['#{@variable}'] = map_values[Number(result_json['#{@variable}'']) - 1];\r\n"
else else
@ -236,7 +236,7 @@ class Cancerpredictfields
result = {}; result = {};
#{js_code} #{js_code}
try{ try{
result['lpv'] = (#{formula}); result['lpv'] = (#{formula.gsub(/\s{2,10}/," ")});
}catch(e){result['lpv'] = \"error\"}; }catch(e){result['lpv'] = \"error\"};
console.log(result['lpv']); console.log(result['lpv']);
#{formula_variables.map{|v| "result['lpv_variable']['#{v}'] = #{v};"}.join("\r\n\t\t\t\t") } #{formula_variables.map{|v| "result['lpv_variable']['#{v}'] = #{v};"}.join("\r\n\t\t\t\t") }
@ -259,26 +259,24 @@ class Cancerpredictfields
};" };"
@years = self.years @years = self.years
switch_texts = " switch_texts = "
#{formula_variables.map{|v| "var #{v} = obj['#{v}'];"}.join("\r\n\t\t\t\t")} #{formula_variables.map{|v| "var #{v} = obj['#{v}'];"}.join("\n ")}
switch(year) {" switch(year) {"
@years.each do |year| @years.each do |year|
year_index = @years.index(year) year_index = @years.index(year)
switch_texts += switch_texts +=
" "
case '#{year}': case '#{year}':
servive_ratio = #{self.tmp_years_settings[year_index]}; servive_ratio = #{self.tmp_years_settings[year_index]};
break; break;"
"
end end
switch_texts += " switch_texts += "
default: default:
console.log('not found year.'); console.log('not found year.');
}" }"
js_code = js_code +" js_code = js_code +"
function calculate_servive_ratio(year,obj){ function calculate_servive_ratio(year,obj){
var servive_ratio; var servive_ratio;#{switch_texts}
#{switch_texts}
return servive_ratio; return servive_ratio;
} }
" "